Here is an ongoing effort to collect proposals about reforming scientific publishing, as well as data-collection, data-handling, and data-analysis practices:

http://filedrawer.wordpress.com/2012/04/17/its-the-incentives-structure-people-why-science-reform-must-come-from-the-granting-agencies/

http://www.brendan-nyhan.com/blog/2012/04/academic-reforms-a-four-part-proposal.html

http://futureofscipub.wordpress.com/2009/11/12/open-post-publication-peer-review/

http://neuroskeptic.blogspot.com/2012/04/fixing-science-systems-and-politics.html

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